Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CQC3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CQC3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Q9CQC3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.84■□□□□ 0.61
Q9CQC3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Q9CQC3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Q9CQC3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CQC3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CQC3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9CQC3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q9CQC3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Q9CQC3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q9CQC3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.83■□□□□ 0.6
Q9CQC3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CQC3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CQC3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Q9CQC3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Q9CQC3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CQC3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CQC3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CQC3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9CQC3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Q9CQC3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Q9CQC3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.82■□□□□ 0.6
Q9CQC3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Q9CQC3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.82■□□□□ 0.6
Q9CQC3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.82■□□□□ 0.6
Q9CQC3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.82■□□□□ 0.6
Q9CQC3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.82■□□□□ 0.6
Q9CQC3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Q9CQC3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9CQC3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Q9CQC3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Q9CQC3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQC3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Q9CQC3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQC3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQC3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Q9CQC3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQC3 Gm38285-201ENSMUST00000192928 922 ntBASIC18.81■□□□□ 0.6
Q9CQC3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Q9CQC3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQC3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQC3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q9CQC3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Q9CQC3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Q9CQC3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.8■□□□□ 0.6
Q9CQC3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9CQC3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.8■□□□□ 0.6
Q9CQC3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.8■□□□□ 0.6
Q9CQC3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.8■□□□□ 0.6
Q9CQC3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.8■□□□□ 0.6
Q9CQC3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q9CQC3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.79■□□□□ 0.6
Q9CQC3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q9CQC3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Q9CQC3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQC3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQC3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQC3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.78■□□□□ 0.6
Q9CQC3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQC3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQC3 Zfp783-201ENSMUST00000095946 670 ntBASIC18.78■□□□□ 0.6
Q9CQC3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q9CQC3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQC3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQC3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQC3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQC3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q9CQC3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms