Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mrpl54Q9CPW3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.11■□□□□ 0.17
Mrpl54Q9CPW3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mrpl54Q9CPW3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Gm7860-201ENSMUST00000121190 879 ntBASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mrpl54Q9CPW3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Mrpl54Q9CPW3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mrpl54Q9CPW3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Mrpl54Q9CPW3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Mrpl54Q9CPW3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mrpl54Q9CPW3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mrpl54Q9CPW3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Mrpl54Q9CPW3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms