Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim11Q99PQ2 Rarb-207ENSMUST00000225921 2756 ntBASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim11Q99PQ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim11Q99PQ2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim11Q99PQ2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim11Q99PQ2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim11Q99PQ2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim11Q99PQ2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim11Q99PQ2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim11Q99PQ2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim11Q99PQ2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim11Q99PQ2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim11Q99PQ2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim11Q99PQ2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim11Q99PQ2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Gm10849-201ENSMUST00000100397 618 ntBASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim11Q99PQ2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim11Q99PQ2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim11Q99PQ2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim11Q99PQ2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim11Q99PQ2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim11Q99PQ2 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Gm26571-201ENSMUST00000181399 666 ntBASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim11Q99PQ2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim11Q99PQ2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms