Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.77■□□□□ 0.92
Pcdh15Q99PJ1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh15Q99PJ1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh15Q99PJ1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdh15Q99PJ1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdh15Q99PJ1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Gm7791-201ENSMUST00000219066 539 ntBASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh15Q99PJ1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdh15Q99PJ1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh15Q99PJ1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh15Q99PJ1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcdh15Q99PJ1 Gm27357-201ENSMUST00000183754 135 ntBASIC20.73■□□□□ 0.91
Pcdh15Q99PJ1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcdh15Q99PJ1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdh15Q99PJ1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh15Q99PJ1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh15Q99PJ1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh15Q99PJ1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Gm21559-201ENSMUST00000220638 855 ntBASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Gm8587-201ENSMUST00000076538 843 ntBASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh15Q99PJ1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdh15Q99PJ1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdh15Q99PJ1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Gm7638-201ENSMUST00000121348 967 ntBASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh15Q99PJ1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms