Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlr3Q99MB1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.44■□□□□ 0.7
Tlr3Q99MB1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Tlr3Q99MB1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.42■□□□□ 0.7
Tlr3Q99MB1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.42■□□□□ 0.7
Tlr3Q99MB1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tlr3Q99MB1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.41■□□□□ 0.7
Tlr3Q99MB1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tlr3Q99MB1 Tgds-204ENSMUST00000228543 1594 ntBASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Gm12527-201ENSMUST00000117967 564 ntBASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Gm26524-201ENSMUST00000192339 390 ntBASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.4■□□□□ 0.7
Tlr3Q99MB1 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlr3Q99MB1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tlr3Q99MB1 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.39■□□□□ 0.7
Tlr3Q99MB1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.39■□□□□ 0.7
Tlr3Q99MB1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tlr3Q99MB1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tlr3Q99MB1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlr3Q99MB1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms