Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Mir2861-201ENSMUST00000175539 82 ntBASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.36■□□□□ 0.53
Smarcd2Q99JR8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd2Q99JR8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smarcd2Q99JR8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smarcd2Q99JR8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Smarcd2Q99JR8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smarcd2Q99JR8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Gm6659-201ENSMUST00000174752 547 ntBASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smarcd2Q99JR8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcd2Q99JR8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcd2Q99JR8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd2Q99JR8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms