Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb22Q91XZ8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb22Q91XZ8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb22Q91XZ8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb22Q91XZ8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb22Q91XZ8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb22Q91XZ8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhb22Q91XZ8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhb22Q91XZ8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb22Q91XZ8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Gm11249-201ENSMUST00000117071 859 ntBASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb22Q91XZ8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Fst-202ENSMUST00000223640 2612 ntBASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb22Q91XZ8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb22Q91XZ8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Gm27275-201ENSMUST00000184318 272 ntBASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Gm37856-201ENSMUST00000191634 999 ntBASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb22Q91XZ8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb22Q91XZ8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms