Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga11Q91XY8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga11Q91XY8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Gm29257-201ENSMUST00000186115 639 ntBASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga11Q91XY8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga11Q91XY8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga11Q91XY8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Fst-202ENSMUST00000223640 2612 ntBASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga11Q91XY8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Gm37179-201ENSMUST00000194862 823 ntBASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga11Q91XY8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga11Q91XY8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms