Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trex1Q91XB0 BC021767-201ENSMUST00000126387 1716 ntBASIC20.84■□□□□ 0.93
Trex1Q91XB0 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.84■□□□□ 0.93
Trex1Q91XB0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trex1Q91XB0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trex1Q91XB0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trex1Q91XB0 Mir2861-201ENSMUST00000175539 82 ntBASIC20.84■□□□□ 0.93
Trex1Q91XB0 Gm10231-201ENSMUST00000181584 441 ntBASIC20.84■□□□□ 0.93
Trex1Q91XB0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trex1Q91XB0 Gm10175-202ENSMUST00000208752 441 ntBASIC20.84■□□□□ 0.93
Trex1Q91XB0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trex1Q91XB0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trex1Q91XB0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trex1Q91XB0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.83■□□□□ 0.93
Trex1Q91XB0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trex1Q91XB0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trex1Q91XB0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trex1Q91XB0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.83■□□□□ 0.93
Trex1Q91XB0 Timm23-208ENSMUST00000226683 750 ntBASIC20.83■□□□□ 0.93
Trex1Q91XB0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trex1Q91XB0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trex1Q91XB0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trex1Q91XB0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trex1Q91XB0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trex1Q91XB0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Trex1Q91XB0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trex1Q91XB0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Gm3375-201ENSMUST00000203929 796 ntBASIC20.82■□□□□ 0.92
Trex1Q91XB0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trex1Q91XB0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.81■□□□□ 0.92
Trex1Q91XB0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.81■□□□□ 0.92
Trex1Q91XB0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.81■□□□□ 0.92
Trex1Q91XB0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trex1Q91XB0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.8■□□□□ 0.92
Trex1Q91XB0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.8■□□□□ 0.92
Trex1Q91XB0 Gm11539-201ENSMUST00000119837 557 ntBASIC20.8■□□□□ 0.92
Trex1Q91XB0 Gm13436-201ENSMUST00000120418 567 ntBASIC20.8■□□□□ 0.92
Trex1Q91XB0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trex1Q91XB0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trex1Q91XB0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Trex1Q91XB0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.79■□□□□ 0.92
Trex1Q91XB0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trex1Q91XB0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trex1Q91XB0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trex1Q91XB0 Gm13559-201ENSMUST00000120476 863 ntBASIC20.79■□□□□ 0.92
Trex1Q91XB0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trex1Q91XB0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trex1Q91XB0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trex1Q91XB0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.79■□□□□ 0.92
Trex1Q91XB0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trex1Q91XB0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trex1Q91XB0 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.78■□□□□ 0.92
Trex1Q91XB0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms