Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Usp3Q91W36 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.66■□□□□ 0.58
Usp3Q91W36 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Usp3Q91W36 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp3Q91W36 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Gm13158-201ENSMUST00000122007 736 ntBASIC18.66■□□□□ 0.58
Usp3Q91W36 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.66■□□□□ 0.58
Usp3Q91W36 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Usp3Q91W36 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp3Q91W36 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp3Q91W36 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp3Q91W36 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Usp3Q91W36 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Gm18666-201ENSMUST00000190039 958 ntBASIC18.65■□□□□ 0.58
Usp3Q91W36 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp3Q91W36 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Usp3Q91W36 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Usp3Q91W36 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp3Q91W36 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp3Q91W36 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Usp3Q91W36 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.64■□□□□ 0.57
Usp3Q91W36 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Mtag2-201ENSMUST00000058665 714 ntBASIC18.64■□□□□ 0.57
Usp3Q91W36 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp3Q91W36 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp3Q91W36 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp3Q91W36 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp3Q91W36 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp3Q91W36 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp3Q91W36 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Usp3Q91W36 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp3Q91W36 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp3Q91W36 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp3Q91W36 Grk6-206ENSMUST00000224995 2971 ntBASIC18.63■□□□□ 0.57
Usp3Q91W36 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Usp3Q91W36 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp3Q91W36 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp3Q91W36 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp3Q91W36 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Usp3Q91W36 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp3Q91W36 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp3Q91W36 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp3Q91W36 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp3Q91W36 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp3Q91W36 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp3Q91W36 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp3Q91W36 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp3Q91W36 Fst-202ENSMUST00000223640 2612 ntBASIC18.62■□□□□ 0.57
Usp3Q91W36 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp3Q91W36 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Usp3Q91W36 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp3Q91W36 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.61■□□□□ 0.57
Usp3Q91W36 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp3Q91W36 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp3Q91W36 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp3Q91W36 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usp3Q91W36 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp3Q91W36 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp3Q91W36 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp3Q91W36 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp3Q91W36 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp3Q91W36 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp3Q91W36 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp3Q91W36 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp3Q91W36 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.6■□□□□ 0.57
Usp3Q91W36 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.6■□□□□ 0.57
Usp3Q91W36 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.6■□□□□ 0.57
Usp3Q91W36 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.6■□□□□ 0.57
Usp3Q91W36 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp3Q91W36 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms