Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.89■■□□□ 1.09
StrcQ8VIM6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
StrcQ8VIM6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
StrcQ8VIM6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
StrcQ8VIM6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
StrcQ8VIM6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
StrcQ8VIM6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Gm27357-201ENSMUST00000183754 135 ntBASIC21.87■■□□□ 1.09
StrcQ8VIM6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
StrcQ8VIM6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.86■■□□□ 1.09
StrcQ8VIM6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
StrcQ8VIM6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
StrcQ8VIM6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
StrcQ8VIM6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
StrcQ8VIM6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
StrcQ8VIM6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
StrcQ8VIM6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
StrcQ8VIM6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
StrcQ8VIM6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
StrcQ8VIM6 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.83■■□□□ 1.08
StrcQ8VIM6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.83■■□□□ 1.08
StrcQ8VIM6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
StrcQ8VIM6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
StrcQ8VIM6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
StrcQ8VIM6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
StrcQ8VIM6 Gm13401-201ENSMUST00000117074 291 ntBASIC21.82■■□□□ 1.08
StrcQ8VIM6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
StrcQ8VIM6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
StrcQ8VIM6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
StrcQ8VIM6 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.82■■□□□ 1.08
StrcQ8VIM6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
StrcQ8VIM6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
StrcQ8VIM6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Gm21559-201ENSMUST00000220638 855 ntBASIC21.8■■□□□ 1.08
StrcQ8VIM6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Gm8587-201ENSMUST00000076538 843 ntBASIC21.8■■□□□ 1.08
StrcQ8VIM6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
StrcQ8VIM6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms