Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps4aQ8VEJ9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps4aQ8VEJ9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps4aQ8VEJ9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps4aQ8VEJ9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.52■□□□□ 0.4
Vps4aQ8VEJ9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.52■□□□□ 0.39
Vps4aQ8VEJ9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Vps4aQ8VEJ9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps4aQ8VEJ9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps4aQ8VEJ9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms