Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rpa1Q8VEE4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpa1Q8VEE4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpa1Q8VEE4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpa1Q8VEE4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rpa1Q8VEE4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rpa1Q8VEE4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpa1Q8VEE4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpa1Q8VEE4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpa1Q8VEE4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms