Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim29Q8R2Q0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim29Q8R2Q0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim29Q8R2Q0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim29Q8R2Q0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim29Q8R2Q0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Gm6211-202ENSMUST00000167849 925 ntBASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Gm7291-201ENSMUST00000199147 382 ntBASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim29Q8R2Q0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim29Q8R2Q0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim29Q8R2Q0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim29Q8R2Q0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim29Q8R2Q0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.64■□□□□ 0.9
Trim29Q8R2Q0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms