Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Gm12527-201ENSMUST00000117967 564 ntBASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
Sf3a1Q8K4Z5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sf3a1Q8K4Z5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.14■■□□□ 1.14
Sf3a1Q8K4Z5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sf3a1Q8K4Z5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sf3a1Q8K4Z5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sf3a1Q8K4Z5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sf3a1Q8K4Z5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Gm2559-201ENSMUST00000201323 363 ntBASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Sf3a1Q8K4Z5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sf3a1Q8K4Z5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Gm12896-201ENSMUST00000118430 226 ntBASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Dio3-201ENSMUST00000097228 1449 ntBASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Sf3a1Q8K4Z5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sf3a1Q8K4Z5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sf3a1Q8K4Z5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sf3a1Q8K4Z5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms