Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfwd3Q8CIK8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Gm26524-201ENSMUST00000192339 390 ntBASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfwd3Q8CIK8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfwd3Q8CIK8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Gm29257-201ENSMUST00000186115 639 ntBASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rfwd3Q8CIK8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfwd3Q8CIK8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfwd3Q8CIK8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Rab3c-203ENSMUST00000224180 967 ntBASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Gm4968-201ENSMUST00000071458 858 ntBASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rfwd3Q8CIK8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfwd3Q8CIK8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms