Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h3Q8CHP0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Mir3081-201ENSMUST00000175305 84 ntBASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Gm18115-201ENSMUST00000221209 621 ntBASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h3Q8CHP0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zc3h3Q8CHP0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Zc3h3Q8CHP0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Zc3h3Q8CHP0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zc3h3Q8CHP0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zc3h3Q8CHP0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zc3h3Q8CHP0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Zc3h3Q8CHP0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3h3Q8CHP0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Mir2861-201ENSMUST00000175539 82 ntBASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3h3Q8CHP0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms