Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.19■□□□□ 0.18
ShfQ8CG80 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ShfQ8CG80 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.18■□□□□ 0.18
ShfQ8CG80 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ShfQ8CG80 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ShfQ8CG80 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.18■□□□□ 0.18
ShfQ8CG80 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShfQ8CG80 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.17■□□□□ 0.18
ShfQ8CG80 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.17■□□□□ 0.18
ShfQ8CG80 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.17■□□□□ 0.18
ShfQ8CG80 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ShfQ8CG80 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.17■□□□□ 0.18
ShfQ8CG80 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ShfQ8CG80 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
ShfQ8CG80 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.16■□□□□ 0.18
ShfQ8CG80 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.16■□□□□ 0.18
ShfQ8CG80 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ShfQ8CG80 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.16■□□□□ 0.18
ShfQ8CG80 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ShfQ8CG80 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.15■□□□□ 0.18
ShfQ8CG80 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
ShfQ8CG80 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ShfQ8CG80 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
ShfQ8CG80 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ShfQ8CG80 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.15■□□□□ 0.18
ShfQ8CG80 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.15■□□□□ 0.18
ShfQ8CG80 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
ShfQ8CG80 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ShfQ8CG80 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ShfQ8CG80 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ShfQ8CG80 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ShfQ8CG80 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
ShfQ8CG80 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.14■□□□□ 0.17
ShfQ8CG80 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
ShfQ8CG80 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.14■□□□□ 0.17
ShfQ8CG80 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
ShfQ8CG80 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
ShfQ8CG80 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ShfQ8CG80 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ShfQ8CG80 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ShfQ8CG80 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms