Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Gm12085-201ENSMUST00000119263 940 ntBASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Zswim3Q8CFL8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zswim3Q8CFL8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Zswim3Q8CFL8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zswim3Q8CFL8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Gm28033-201ENSMUST00000184224 96 ntBASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Gm38027-201ENSMUST00000192315 235 ntBASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zswim3Q8CFL8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zswim3Q8CFL8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zswim3Q8CFL8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Zswim3Q8CFL8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Zswim3Q8CFL8 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.87■□□□□ 0.77
Zswim3Q8CFL8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Zswim3Q8CFL8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Gm27704-201ENSMUST00000185094 107 ntBASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zswim3Q8CFL8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zswim3Q8CFL8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Zswim3Q8CFL8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Zswim3Q8CFL8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zswim3Q8CFL8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Zswim3Q8CFL8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.85■□□□□ 0.77
Zswim3Q8CFL8 Gm44771-201ENSMUST00000206975 626 ntBASIC19.85■□□□□ 0.77
Zswim3Q8CFL8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms