Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.3■□□□□ 0.68
Fam78aQ8C552 Gm3375-201ENSMUST00000203929 796 ntBASIC19.3■□□□□ 0.68
Fam78aQ8C552 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam78aQ8C552 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.3■□□□□ 0.68
Fam78aQ8C552 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Fam78aQ8C552 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam78aQ8C552 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fam78aQ8C552 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.28■□□□□ 0.68
Fam78aQ8C552 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.28■□□□□ 0.68
Fam78aQ8C552 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Mir2861-201ENSMUST00000175539 82 ntBASIC19.27■□□□□ 0.68
Fam78aQ8C552 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam78aQ8C552 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Fam78aQ8C552 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Fam78aQ8C552 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Fam78aQ8C552 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam78aQ8C552 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fam78aQ8C552 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.25■□□□□ 0.67
Fam78aQ8C552 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Fam78aQ8C552 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam78aQ8C552 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Fam78aQ8C552 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fam78aQ8C552 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam78aQ8C552 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Fam78aQ8C552 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Fam78aQ8C552 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.23■□□□□ 0.67
Fam78aQ8C552 Gm7889-201ENSMUST00000185591 958 ntBASIC19.23■□□□□ 0.67
Fam78aQ8C552 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.23■□□□□ 0.67
Fam78aQ8C552 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam78aQ8C552 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.22■□□□□ 0.67
Fam78aQ8C552 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam78aQ8C552 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam78aQ8C552 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms