Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smim4Q8C1Q6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Smim4Q8C1Q6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim4Q8C1Q6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Gm13534-201ENSMUST00000121169 513 ntBASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smim4Q8C1Q6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Gm13234-201ENSMUST00000120010 747 ntBASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smim4Q8C1Q6 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim4Q8C1Q6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms