Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trub1Q8C0D0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trub1Q8C0D0 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.71■□□□□ 0.59
Trub1Q8C0D0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trub1Q8C0D0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Trub1Q8C0D0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trub1Q8C0D0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trub1Q8C0D0 Rarb-207ENSMUST00000225921 2756 ntBASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trub1Q8C0D0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trub1Q8C0D0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Gm26524-201ENSMUST00000192339 390 ntBASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trub1Q8C0D0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Gm12933-201ENSMUST00000120203 872 ntBASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Trub1Q8C0D0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trub1Q8C0D0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trub1Q8C0D0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms