Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tubgcp5Q8BKN5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tubgcp5Q8BKN5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
Tubgcp5Q8BKN5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Gm38205-201ENSMUST00000192243 258 ntBASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tubgcp5Q8BKN5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tubgcp5Q8BKN5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Tubgcp5Q8BKN5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tubgcp5Q8BKN5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp5Q8BKN5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tubgcp5Q8BKN5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp5Q8BKN5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp5Q8BKN5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp5Q8BKN5 Gm45906-201ENSMUST00000208911 1430 ntBASIC18■□□□□ 0.47
Tubgcp5Q8BKN5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms