Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop53Q8BK35 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nop53Q8BK35 Gm27405-201ENSMUST00000184201 112 ntBASIC19.43■□□□□ 0.7
Nop53Q8BK35 Gm10033-202ENSMUST00000211874 928 ntBASIC19.43■□□□□ 0.7
Nop53Q8BK35 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nop53Q8BK35 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.42■□□□□ 0.7
Nop53Q8BK35 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Nop53Q8BK35 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.41■□□□□ 0.7
Nop53Q8BK35 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.41■□□□□ 0.7
Nop53Q8BK35 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.41■□□□□ 0.7
Nop53Q8BK35 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nop53Q8BK35 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Gm42569-201ENSMUST00000200539 472 ntBASIC19.4■□□□□ 0.7
Nop53Q8BK35 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.4■□□□□ 0.7
Nop53Q8BK35 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nop53Q8BK35 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.4■□□□□ 0.7
Nop53Q8BK35 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nop53Q8BK35 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop53Q8BK35 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.39■□□□□ 0.69
Nop53Q8BK35 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nop53Q8BK35 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nop53Q8BK35 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Reep4-203ENSMUST00000226563 1444 ntBASIC19.37■□□□□ 0.69
Nop53Q8BK35 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.37■□□□□ 0.69
Nop53Q8BK35 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nop53Q8BK35 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms