Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc116Q80X53 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc116Q80X53 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.71■□□□□ 0.43
Ccdc116Q80X53 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc116Q80X53 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.71■□□□□ 0.42
Ccdc116Q80X53 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Gm8495-201ENSMUST00000188740 694 ntBASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Gm42569-201ENSMUST00000200539 472 ntBASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Gm6365-201ENSMUST00000054711 744 ntBASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc116Q80X53 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc116Q80X53 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc116Q80X53 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms