Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snd1Q78PY7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snd1Q78PY7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snd1Q78PY7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Snd1Q78PY7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.72■□□□□ 0.75
Snd1Q78PY7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Snd1Q78PY7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.72■□□□□ 0.75
Snd1Q78PY7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snd1Q78PY7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Snd1Q78PY7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.71■□□□□ 0.75
Snd1Q78PY7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snd1Q78PY7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snd1Q78PY7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Gm18671-201ENSMUST00000214826 683 ntBASIC19.69■□□□□ 0.74
Snd1Q78PY7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snd1Q78PY7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Gm10849-201ENSMUST00000100397 618 ntBASIC19.68■□□□□ 0.74
Snd1Q78PY7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Snd1Q78PY7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snd1Q78PY7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snd1Q78PY7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms