Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm9987-201ENSMUST00000069768 567 ntBASIC18.74■□□□□ 0.59
Cspg5Q71M36 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.74■□□□□ 0.59
Cspg5Q71M36 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cspg5Q71M36 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.73■□□□□ 0.59
Cspg5Q71M36 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.73■□□□□ 0.59
Cspg5Q71M36 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cspg5Q71M36 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Gm15378-201ENSMUST00000121894 207 ntBASIC18.72■□□□□ 0.59
Cspg5Q71M36 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cspg5Q71M36 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cspg5Q71M36 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.71■□□□□ 0.59
Cspg5Q71M36 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cspg5Q71M36 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cspg5Q71M36 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cspg5Q71M36 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cspg5Q71M36 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.71■□□□□ 0.59
Cspg5Q71M36 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Cspg5Q71M36 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Mir1199-201ENSMUST00000117015 119 ntBASIC18.7■□□□□ 0.58
Cspg5Q71M36 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cspg5Q71M36 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.7■□□□□ 0.58
Cspg5Q71M36 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.7■□□□□ 0.58
Cspg5Q71M36 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cspg5Q71M36 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cspg5Q71M36 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cspg5Q71M36 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Gm13158-201ENSMUST00000122007 736 ntBASIC18.68■□□□□ 0.58
Cspg5Q71M36 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cspg5Q71M36 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.68■□□□□ 0.58
Cspg5Q71M36 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cspg5Q71M36 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms