Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Gm25016-201ENSMUST00000158399 131 ntBASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Gm28033-201ENSMUST00000184224 96 ntBASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85bQ6PDY0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85bQ6PDY0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ccdc85bQ6PDY0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc85bQ6PDY0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc85bQ6PDY0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc85bQ6PDY0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc85bQ6PDY0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Gm7153-201ENSMUST00000117092 455 ntBASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85bQ6PDY0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Gm27463-201ENSMUST00000183569 57 ntBASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Gm27704-201ENSMUST00000185094 107 ntBASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc85bQ6PDY0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85bQ6PDY0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Gm12085-201ENSMUST00000119263 940 ntBASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Gm2274-201ENSMUST00000184539 609 ntBASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85bQ6PDY0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Gm17807-201ENSMUST00000186869 298 ntBASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc85bQ6PDY0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms