Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Casc4Q6P2L7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.33■□□□□ 0.53
Casc4Q6P2L7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Casc4Q6P2L7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Casc4Q6P2L7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Casc4Q6P2L7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Casc4Q6P2L7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Casc4Q6P2L7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Gm26524-201ENSMUST00000192339 390 ntBASIC18.29■□□□□ 0.52
Casc4Q6P2L7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Casc4Q6P2L7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Rab3c-203ENSMUST00000224180 967 ntBASIC18.28■□□□□ 0.52
Casc4Q6P2L7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.28■□□□□ 0.52
Casc4Q6P2L7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms