Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Gm6365-201ENSMUST00000054711 744 ntBASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.38■□□□□ 0.53
Sp140Q6NSQ5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sp140Q6NSQ5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sp140Q6NSQ5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sp140Q6NSQ5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sp140Q6NSQ5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sp140Q6NSQ5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sp140Q6NSQ5 Gm7291-201ENSMUST00000199147 382 ntBASIC18.33■□□□□ 0.52
Sp140Q6NSQ5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sp140Q6NSQ5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sp140Q6NSQ5 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.33■□□□□ 0.52
Sp140Q6NSQ5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.33■□□□□ 0.52
Sp140Q6NSQ5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sp140Q6NSQ5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms