Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AtmQ62388 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AtmQ62388 Mir5130-201ENSMUST00000175160 84 ntBASIC17.22■□□□□ 0.35
AtmQ62388 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
AtmQ62388 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.22■□□□□ 0.35
AtmQ62388 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AtmQ62388 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.22■□□□□ 0.35
AtmQ62388 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.22■□□□□ 0.35
AtmQ62388 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AtmQ62388 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AtmQ62388 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AtmQ62388 Gm34391-201ENSMUST00000203706 907 ntBASIC17.22■□□□□ 0.35
AtmQ62388 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AtmQ62388 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
AtmQ62388 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AtmQ62388 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
AtmQ62388 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AtmQ62388 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.21■□□□□ 0.35
AtmQ62388 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.21■□□□□ 0.35
AtmQ62388 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AtmQ62388 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AtmQ62388 Gm18669-201ENSMUST00000216049 778 ntBASIC17.21■□□□□ 0.35
AtmQ62388 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AtmQ62388 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AtmQ62388 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AtmQ62388 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
AtmQ62388 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Golph3-205ENSMUST00000228671 2842 ntBASIC17.2■□□□□ 0.34
AtmQ62388 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.2■□□□□ 0.34
AtmQ62388 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
AtmQ62388 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Gm5587-201ENSMUST00000206270 674 ntBASIC17.2■□□□□ 0.34
AtmQ62388 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AtmQ62388 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AtmQ62388 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
AtmQ62388 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.2■□□□□ 0.34
AtmQ62388 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.2■□□□□ 0.34
AtmQ62388 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AtmQ62388 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.2■□□□□ 0.34
AtmQ62388 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.2■□□□□ 0.34
AtmQ62388 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
AtmQ62388 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AtmQ62388 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.19■□□□□ 0.34
AtmQ62388 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
AtmQ62388 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.19■□□□□ 0.34
AtmQ62388 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AtmQ62388 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AtmQ62388 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AtmQ62388 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
AtmQ62388 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AtmQ62388 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.18■□□□□ 0.34
AtmQ62388 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AtmQ62388 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AtmQ62388 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
AtmQ62388 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AtmQ62388 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
AtmQ62388 Mir6349-201ENSMUST00000184059 97 ntBASIC17.18■□□□□ 0.34
AtmQ62388 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.18■□□□□ 0.34
AtmQ62388 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
AtmQ62388 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.17■□□□□ 0.34
AtmQ62388 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AtmQ62388 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
AtmQ62388 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.17■□□□□ 0.34
AtmQ62388 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AtmQ62388 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
AtmQ62388 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
AtmQ62388 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
AtmQ62388 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
AtmQ62388 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Gm38027-201ENSMUST00000192315 235 ntBASIC17.17■□□□□ 0.34
AtmQ62388 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Gm29518-201ENSMUST00000190858 372 ntBASIC17.17■□□□□ 0.34
AtmQ62388 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AtmQ62388 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
AtmQ62388 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AtmQ62388 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.16■□□□□ 0.34
AtmQ62388 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.16■□□□□ 0.34
AtmQ62388 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AtmQ62388 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.16■□□□□ 0.34
AtmQ62388 Gm24589-201ENSMUST00000116692 94 ntBASIC17.16■□□□□ 0.34
AtmQ62388 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.16■□□□□ 0.34
AtmQ62388 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms