Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scnn1aQ61180 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.92■□□□□ 0.94
Scnn1aQ61180 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Scnn1aQ61180 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.92■□□□□ 0.94
Scnn1aQ61180 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scnn1aQ61180 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Gm15565-201ENSMUST00000118890 427 ntBASIC20.91■□□□□ 0.94
Scnn1aQ61180 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Scnn1aQ61180 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.91■□□□□ 0.94
Scnn1aQ61180 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.91■□□□□ 0.94
Scnn1aQ61180 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Scnn1aQ61180 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Gm21814-202ENSMUST00000203277 873 ntBASIC20.9■□□□□ 0.94
Scnn1aQ61180 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.9■□□□□ 0.94
Scnn1aQ61180 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scnn1aQ61180 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scnn1aQ61180 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scnn1aQ61180 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Scnn1aQ61180 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scnn1aQ61180 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scnn1aQ61180 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scnn1aQ61180 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scnn1aQ61180 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Scnn1aQ61180 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.86■□□□□ 0.93
Scnn1aQ61180 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Gm5417-201ENSMUST00000079706 384 ntBASIC20.86■□□□□ 0.93
Scnn1aQ61180 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scnn1aQ61180 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.85■□□□□ 0.93
Scnn1aQ61180 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.85■□□□□ 0.93
Scnn1aQ61180 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.85■□□□□ 0.93
Scnn1aQ61180 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.85■□□□□ 0.93
Scnn1aQ61180 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.85■□□□□ 0.93
Scnn1aQ61180 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Odf3b-204ENSMUST00000227834 930 ntBASIC20.85■□□□□ 0.93
Scnn1aQ61180 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.85■□□□□ 0.93
Scnn1aQ61180 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scnn1aQ61180 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms