Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.28■□□□□ 0.36
Nr1h4Q60641 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nr1h4Q60641 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nr1h4Q60641 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h4Q60641 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h4Q60641 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h4Q60641 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h4Q60641 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h4Q60641 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Gm6139-201ENSMUST00000079261 882 ntBASIC17.25■□□□□ 0.35
Nr1h4Q60641 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.25■□□□□ 0.35
Nr1h4Q60641 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nr1h4Q60641 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.24■□□□□ 0.35
Nr1h4Q60641 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.24■□□□□ 0.35
Nr1h4Q60641 Gm40848-201ENSMUST00000221998 324 ntBASIC17.24■□□□□ 0.35
Nr1h4Q60641 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h4Q60641 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.24■□□□□ 0.35
Nr1h4Q60641 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h4Q60641 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Nr1h4Q60641 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h4Q60641 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h4Q60641 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.23■□□□□ 0.35
Nr1h4Q60641 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h4Q60641 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h4Q60641 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h4Q60641 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms