Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tsr1Q5SWD9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tsr1Q5SWD9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsr1Q5SWD9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tsr1Q5SWD9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tsr1Q5SWD9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tsr1Q5SWD9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tsr1Q5SWD9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tsr1Q5SWD9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms