Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Gm11421-201ENSMUST00000122124 294 ntBASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Smad6-203ENSMUST00000179458 273 ntBASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8d-1Q5R1H8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav8d-1Q5R1H8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav8d-1Q5R1H8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav8d-1Q5R1H8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8d-1Q5R1H8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Gm43060-201ENSMUST00000200621 289 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms