Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf20Q5DTM8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Tgds-204ENSMUST00000228543 1594 ntBASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf20Q5DTM8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf20Q5DTM8 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.58■■□□□ 1.04
Rnf20Q5DTM8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf20Q5DTM8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf20Q5DTM8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf20Q5DTM8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Gm7291-201ENSMUST00000199147 382 ntBASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf20Q5DTM8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf20Q5DTM8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf20Q5DTM8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf20Q5DTM8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Mir5133-201ENSMUST00000174955 77 ntBASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf20Q5DTM8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms