Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Srrm1Q52KI8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.34■□□□□ 0.85
Srrm1Q52KI8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm1Q52KI8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.33■□□□□ 0.85
Srrm1Q52KI8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm1Q52KI8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm1Q52KI8 AA414768-201ENSMUST00000121924 1257 ntBASIC20.33■□□□□ 0.85
Srrm1Q52KI8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm1Q52KI8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm1Q52KI8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Srrm1Q52KI8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Srrm1Q52KI8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Srrm1Q52KI8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Srrm1Q52KI8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Srrm1Q52KI8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Srrm1Q52KI8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Srrm1Q52KI8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Gm33142-201ENSMUST00000193913 867 ntBASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Srrm1Q52KI8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Srrm1Q52KI8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Gm12085-201ENSMUST00000119263 940 ntBASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Gm38285-201ENSMUST00000192928 922 ntBASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.3■□□□□ 0.84
Srrm1Q52KI8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Ank2-226ENSMUST00000189368 339 ntBASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Gm18032-201ENSMUST00000222541 538 ntBASIC20.29■□□□□ 0.84
Srrm1Q52KI8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm1Q52KI8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm1Q52KI8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Gm9103-201ENSMUST00000119371 405 ntBASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm1Q52KI8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Srrm1Q52KI8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Srrm1Q52KI8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms