Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf38aQ4FK66 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38aQ4FK66 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.16■□□□□ 0.98
Prpf38aQ4FK66 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38aQ4FK66 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38aQ4FK66 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Prpf38aQ4FK66 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf38aQ4FK66 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Mir7071-201ENSMUST00000184847 69 ntBASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Gm37292-201ENSMUST00000192062 758 ntBASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf38aQ4FK66 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf38aQ4FK66 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf38aQ4FK66 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf38aQ4FK66 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Prpf38aQ4FK66 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf38aQ4FK66 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.14■□□□□ 0.98
Prpf38aQ4FK66 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf38aQ4FK66 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf38aQ4FK66 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Gm37055-201ENSMUST00000191866 133 ntBASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Prpf38aQ4FK66 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.11■□□□□ 0.97
Prpf38aQ4FK66 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Mir5122-201ENSMUST00000175004 89 ntBASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Prpf38aQ4FK66 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms