Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nhej1Q3KNJ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.33■□□□□ 0.69
Nhej1Q3KNJ2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nhej1Q3KNJ2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nhej1Q3KNJ2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nhej1Q3KNJ2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nhej1Q3KNJ2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nhej1Q3KNJ2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nhej1Q3KNJ2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nhej1Q3KNJ2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nhej1Q3KNJ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nhej1Q3KNJ2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nhej1Q3KNJ2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.29■□□□□ 0.68
Nhej1Q3KNJ2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhej1Q3KNJ2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhej1Q3KNJ2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhej1Q3KNJ2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nhej1Q3KNJ2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhej1Q3KNJ2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms