Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim72Q1XH17 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim72Q1XH17 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.34■□□□□ 0.69
Trim72Q1XH17 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim72Q1XH17 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim72Q1XH17 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim72Q1XH17 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.33■□□□□ 0.68
Trim72Q1XH17 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim72Q1XH17 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim72Q1XH17 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim72Q1XH17 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim72Q1XH17 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim72Q1XH17 Gm2399-201ENSMUST00000104944 225 ntBASIC19.32■□□□□ 0.68
Trim72Q1XH17 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim72Q1XH17 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.32■□□□□ 0.68
Trim72Q1XH17 Gm5408-201ENSMUST00000197998 747 ntBASIC19.32■□□□□ 0.68
Trim72Q1XH17 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim72Q1XH17 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Trim72Q1XH17 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim72Q1XH17 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.31■□□□□ 0.68
Trim72Q1XH17 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim72Q1XH17 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim72Q1XH17 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.29■□□□□ 0.68
Trim72Q1XH17 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim72Q1XH17 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trim72Q1XH17 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms