Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd8Q09XV5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.33■□□□□ 0.2
Chd8Q09XV5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd8Q09XV5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd8Q09XV5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd8Q09XV5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.32■□□□□ 0.2
Chd8Q09XV5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.32■□□□□ 0.2
Chd8Q09XV5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd8Q09XV5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd8Q09XV5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd8Q09XV5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chd8Q09XV5 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.32■□□□□ 0.2
Chd8Q09XV5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd8Q09XV5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd8Q09XV5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.31■□□□□ 0.2
Chd8Q09XV5 Gm15794-201ENSMUST00000120182 631 ntBASIC16.31■□□□□ 0.2
Chd8Q09XV5 Gm12350-201ENSMUST00000121208 462 ntBASIC16.31■□□□□ 0.2
Chd8Q09XV5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.31■□□□□ 0.2
Chd8Q09XV5 Gm43767-201ENSMUST00000198933 381 ntBASIC16.31■□□□□ 0.2
Chd8Q09XV5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.31■□□□□ 0.2
Chd8Q09XV5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd8Q09XV5 Gm12895-201ENSMUST00000122214 226 ntBASIC16.31■□□□□ 0.2
Chd8Q09XV5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.31■□□□□ 0.2
Chd8Q09XV5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd8Q09XV5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd8Q09XV5 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.31■□□□□ 0.2
Chd8Q09XV5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd8Q09XV5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.3■□□□□ 0.2
Chd8Q09XV5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.3■□□□□ 0.2
Chd8Q09XV5 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.3■□□□□ 0.2
Chd8Q09XV5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chd8Q09XV5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.3■□□□□ 0.2
Chd8Q09XV5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd8Q09XV5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chd8Q09XV5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Chd8Q09XV5 Gm27321-201ENSMUST00000185021 205 ntBASIC16.29■□□□□ 0.2
Chd8Q09XV5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Chd8Q09XV5 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.29■□□□□ 0.2
Chd8Q09XV5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd8Q09XV5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd8Q09XV5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd8Q09XV5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chd8Q09XV5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Gm11779-201ENSMUST00000118541 368 ntBASIC16.28■□□□□ 0.2
Chd8Q09XV5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.28■□□□□ 0.2
Chd8Q09XV5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd8Q09XV5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd8Q09XV5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd8Q09XV5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd8Q09XV5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd8Q09XV5 Gm5745-201ENSMUST00000183748 313 ntBASIC16.27■□□□□ 0.2
Chd8Q09XV5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.27■□□□□ 0.2
Chd8Q09XV5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd8Q09XV5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Chd8Q09XV5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.27■□□□□ 0.19
Chd8Q09XV5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.27■□□□□ 0.19
Chd8Q09XV5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.19
Chd8Q09XV5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd8Q09XV5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd8Q09XV5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd8Q09XV5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd8Q09XV5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 Gm27000-201ENSMUST00000182943 842 ntBASIC16.26■□□□□ 0.19
Chd8Q09XV5 Psmb5-202ENSMUST00000227257 622 ntBASIC16.26■□□□□ 0.19
Chd8Q09XV5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd8Q09XV5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms