Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim43cP86449 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Trim43cP86449 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim43cP86449 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim43cP86449 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim43cP86449 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43cP86449 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim43cP86449 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.73■□□□□ 0.75
Trim43cP86449 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Trim43cP86449 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.73■□□□□ 0.75
Trim43cP86449 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.73■□□□□ 0.75
Trim43cP86449 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim43cP86449 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trim43cP86449 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.72■□□□□ 0.75
Trim43cP86449 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim43cP86449 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.72■□□□□ 0.75
Trim43cP86449 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim43cP86449 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim43cP86449 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim43cP86449 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Trim43cP86449 Gm38285-201ENSMUST00000192928 922 ntBASIC19.71■□□□□ 0.75
Trim43cP86449 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim43cP86449 Gm10602-201ENSMUST00000098239 609 ntBASIC19.71■□□□□ 0.75
Trim43cP86449 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Trim43cP86449 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.71■□□□□ 0.75
Trim43cP86449 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim43cP86449 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim43cP86449 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim43cP86449 Zfp783-201ENSMUST00000095946 670 ntBASIC19.7■□□□□ 0.74
Trim43cP86449 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim43cP86449 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim43cP86449 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim43cP86449 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Trim43cP86449 Gm2399-201ENSMUST00000104944 225 ntBASIC19.69■□□□□ 0.74
Trim43cP86449 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43cP86449 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim43cP86449 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim43cP86449 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43cP86449 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43cP86449 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Trim43cP86449 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trim43cP86449 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43cP86449 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim43cP86449 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim43cP86449 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.68■□□□□ 0.74
Trim43cP86449 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim43cP86449 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43cP86449 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms