Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nub1P54729 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.48■□□□□ 0.71
Nub1P54729 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.48■□□□□ 0.71
Nub1P54729 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
Nub1P54729 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nub1P54729 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.48■□□□□ 0.71
Nub1P54729 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.48■□□□□ 0.71
Nub1P54729 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.48■□□□□ 0.71
Nub1P54729 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nub1P54729 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.47■□□□□ 0.71
Nub1P54729 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.47■□□□□ 0.71
Nub1P54729 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nub1P54729 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Nub1P54729 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nub1P54729 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nub1P54729 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.46■□□□□ 0.71
Nub1P54729 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.46■□□□□ 0.71
Nub1P54729 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nub1P54729 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.46■□□□□ 0.71
Nub1P54729 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.46■□□□□ 0.71
Nub1P54729 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nub1P54729 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nub1P54729 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nub1P54729 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nub1P54729 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nub1P54729 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.45■□□□□ 0.7
Nub1P54729 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.45■□□□□ 0.7
Nub1P54729 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.45■□□□□ 0.7
Nub1P54729 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nub1P54729 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.45■□□□□ 0.7
Nub1P54729 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nub1P54729 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nub1P54729 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nub1P54729 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nub1P54729 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nub1P54729 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nub1P54729 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nub1P54729 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Gm44549-201ENSMUST00000208351 577 ntBASIC19.44■□□□□ 0.7
Nub1P54729 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Nub1P54729 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nub1P54729 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nub1P54729 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nub1P54729 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nub1P54729 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.43■□□□□ 0.7
Nub1P54729 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.43■□□□□ 0.7
Nub1P54729 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.43■□□□□ 0.7
Nub1P54729 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.43■□□□□ 0.7
Nub1P54729 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.43■□□□□ 0.7
Nub1P54729 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nub1P54729 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nub1P54729 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nub1P54729 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nub1P54729 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nub1P54729 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.42■□□□□ 0.7
Nub1P54729 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.42■□□□□ 0.7
Nub1P54729 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nub1P54729 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms