Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brca1P48754 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brca1P48754 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Brca1P48754 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brca1P48754 Gm38027-201ENSMUST00000192315 235 ntBASIC20.54■□□□□ 0.88
Brca1P48754 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Brca1P48754 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.54■□□□□ 0.88
Brca1P48754 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.54■□□□□ 0.88
Brca1P48754 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.53■□□□□ 0.88
Brca1P48754 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.53■□□□□ 0.88
Brca1P48754 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Brca1P48754 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brca1P48754 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Brca1P48754 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brca1P48754 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.53■□□□□ 0.88
Brca1P48754 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.53■□□□□ 0.88
Brca1P48754 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Brca1P48754 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Brca1P48754 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Brca1P48754 Gm7153-201ENSMUST00000117092 455 ntBASIC20.52■□□□□ 0.88
Brca1P48754 Gm17661-201ENSMUST00000170317 270 ntBASIC20.52■□□□□ 0.88
Brca1P48754 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Brca1P48754 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Brca1P48754 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.52■□□□□ 0.88
Brca1P48754 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Brca1P48754 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Brca1P48754 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.51■□□□□ 0.87
Brca1P48754 Mir5130-201ENSMUST00000175160 84 ntBASIC20.51■□□□□ 0.87
Brca1P48754 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca1P48754 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Brca1P48754 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.5■□□□□ 0.87
Brca1P48754 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Brca1P48754 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Brca1P48754 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Brca1P48754 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Brca1P48754 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Brca1P48754 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.5■□□□□ 0.87
Brca1P48754 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Brca1P48754 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brca1P48754 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.49■□□□□ 0.87
Brca1P48754 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brca1P48754 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.49■□□□□ 0.87
Brca1P48754 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brca1P48754 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brca1P48754 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Brca1P48754 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Brca1P48754 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.48■□□□□ 0.87
Brca1P48754 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Gm22697-201ENSMUST00000175194 63 ntBASIC20.48■□□□□ 0.87
Brca1P48754 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.48■□□□□ 0.87
Brca1P48754 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca1P48754 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Brca1P48754 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brca1P48754 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca1P48754 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.47■□□□□ 0.87
Brca1P48754 Gm17807-201ENSMUST00000186869 298 ntBASIC20.47■□□□□ 0.87
Brca1P48754 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brca1P48754 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca1P48754 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brca1P48754 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca1P48754 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca1P48754 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.46■□□□□ 0.87
Brca1P48754 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Gm2274-201ENSMUST00000184539 609 ntBASIC20.46■□□□□ 0.87
Brca1P48754 Gm44771-201ENSMUST00000206975 626 ntBASIC20.46■□□□□ 0.87
Brca1P48754 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Brca1P48754 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms