Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cxcl12P40224 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cxcl12P40224 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cxcl12P40224 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.74■□□□□ 0.59
Cxcl12P40224 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Gm7153-201ENSMUST00000117092 455 ntBASIC18.74■□□□□ 0.59
Cxcl12P40224 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cxcl12P40224 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
Cxcl12P40224 Gm44771-201ENSMUST00000206975 626 ntBASIC18.74■□□□□ 0.59
Cxcl12P40224 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.74■□□□□ 0.59
Cxcl12P40224 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cxcl12P40224 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cxcl12P40224 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cxcl12P40224 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cxcl12P40224 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cxcl12P40224 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cxcl12P40224 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cxcl12P40224 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.73■□□□□ 0.59
Cxcl12P40224 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cxcl12P40224 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.73■□□□□ 0.59
Cxcl12P40224 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.73■□□□□ 0.59
Cxcl12P40224 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cxcl12P40224 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cxcl12P40224 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cxcl12P40224 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cxcl12P40224 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cxcl12P40224 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cxcl12P40224 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cxcl12P40224 Gm27389-201ENSMUST00000183622 195 ntBASIC18.72■□□□□ 0.59
Cxcl12P40224 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.72■□□□□ 0.59
Cxcl12P40224 Gm5587-201ENSMUST00000206270 674 ntBASIC18.72■□□□□ 0.59
Cxcl12P40224 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cxcl12P40224 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cxcl12P40224 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cxcl12P40224 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cxcl12P40224 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cxcl12P40224 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Cxcl12P40224 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cxcl12P40224 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.71■□□□□ 0.59
Cxcl12P40224 Gm13474-201ENSMUST00000122466 815 ntBASIC18.71■□□□□ 0.59
Cxcl12P40224 Mir2861-201ENSMUST00000175539 82 ntBASIC18.71■□□□□ 0.59
Cxcl12P40224 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.71■□□□□ 0.59
Cxcl12P40224 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cxcl12P40224 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cxcl12P40224 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cxcl12P40224 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.7■□□□□ 0.58
Cxcl12P40224 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.7■□□□□ 0.58
Cxcl12P40224 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cxcl12P40224 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cxcl12P40224 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cxcl12P40224 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cxcl12P40224 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cxcl12P40224 Gm21559-201ENSMUST00000220638 855 ntBASIC18.69■□□□□ 0.58
Cxcl12P40224 Gm8587-201ENSMUST00000076538 843 ntBASIC18.69■□□□□ 0.58
Cxcl12P40224 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cxcl12P40224 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cxcl12P40224 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cxcl12P40224 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cxcl12P40224 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.69■□□□□ 0.58
Cxcl12P40224 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cxcl12P40224 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Gm9013-201ENSMUST00000132939 882 ntBASIC18.68■□□□□ 0.58
Cxcl12P40224 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms