Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RetP35546 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RetP35546 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RetP35546 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RetP35546 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.96■□□□□ 0.3
RetP35546 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.95■□□□□ 0.3
RetP35546 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RetP35546 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RetP35546 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.94■□□□□ 0.3
RetP35546 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RetP35546 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RetP35546 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RetP35546 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RetP35546 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RetP35546 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.93■□□□□ 0.3
RetP35546 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.93■□□□□ 0.3
RetP35546 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RetP35546 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RetP35546 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RetP35546 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
RetP35546 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RetP35546 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RetP35546 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RetP35546 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.92■□□□□ 0.3
RetP35546 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.92■□□□□ 0.3
RetP35546 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RetP35546 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.92■□□□□ 0.3
RetP35546 Gm6576-201ENSMUST00000169678 883 ntBASIC16.92■□□□□ 0.3
RetP35546 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.92■□□□□ 0.3
RetP35546 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.92■□□□□ 0.3
RetP35546 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RetP35546 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RetP35546 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.92■□□□□ 0.3
RetP35546 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RetP35546 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RetP35546 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.91■□□□□ 0.3
RetP35546 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.91■□□□□ 0.3
RetP35546 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.91■□□□□ 0.3
RetP35546 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.91■□□□□ 0.3
RetP35546 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RetP35546 Gm27275-201ENSMUST00000184318 272 ntBASIC16.91■□□□□ 0.3
RetP35546 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms