Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ApoeP08226 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ApoeP08226 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ApoeP08226 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ApoeP08226 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ApoeP08226 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.14■□□□□ 0.34
ApoeP08226 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ApoeP08226 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.14■□□□□ 0.33
ApoeP08226 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ApoeP08226 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ApoeP08226 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.14■□□□□ 0.33
ApoeP08226 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ApoeP08226 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ApoeP08226 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ApoeP08226 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ApoeP08226 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
ApoeP08226 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Gm9847-201ENSMUST00000052528 599 ntBASIC17.13■□□□□ 0.33
ApoeP08226 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ApoeP08226 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ApoeP08226 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ApoeP08226 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ApoeP08226 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ApoeP08226 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ApoeP08226 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.12■□□□□ 0.33
ApoeP08226 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.12■□□□□ 0.33
ApoeP08226 Gm38205-201ENSMUST00000192243 258 ntBASIC17.12■□□□□ 0.33
ApoeP08226 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.12■□□□□ 0.33
ApoeP08226 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.12■□□□□ 0.33
ApoeP08226 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ApoeP08226 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ApoeP08226 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ApoeP08226 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.11■□□□□ 0.33
ApoeP08226 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.11■□□□□ 0.33
ApoeP08226 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.11■□□□□ 0.33
ApoeP08226 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.11■□□□□ 0.33
ApoeP08226 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.11■□□□□ 0.33
ApoeP08226 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ApoeP08226 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.1■□□□□ 0.33
ApoeP08226 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ApoeP08226 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.1■□□□□ 0.33
ApoeP08226 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ApoeP08226 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ApoeP08226 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms