Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TnfP06804 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Gm43183-201ENSMUST00000200632 547 ntBASIC19.25■□□□□ 0.67
TnfP06804 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TnfP06804 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnfP06804 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.24■□□□□ 0.67
TnfP06804 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.24■□□□□ 0.67
TnfP06804 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TnfP06804 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.24■□□□□ 0.67
TnfP06804 Gm42545-201ENSMUST00000202755 922 ntBASIC19.24■□□□□ 0.67
TnfP06804 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Gm18025-201ENSMUST00000221733 862 ntBASIC19.24■□□□□ 0.67
TnfP06804 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.24■□□□□ 0.67
TnfP06804 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TnfP06804 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TnfP06804 Gm715-201ENSMUST00000117865 831 ntBASIC19.23■□□□□ 0.67
TnfP06804 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.23■□□□□ 0.67
TnfP06804 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.23■□□□□ 0.67
TnfP06804 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TnfP06804 Mir6349-201ENSMUST00000184059 97 ntBASIC19.23■□□□□ 0.67
TnfP06804 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.23■□□□□ 0.67
TnfP06804 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TnfP06804 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.23■□□□□ 0.67
TnfP06804 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.23■□□□□ 0.67
TnfP06804 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TnfP06804 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.22■□□□□ 0.67
TnfP06804 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TnfP06804 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TnfP06804 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TnfP06804 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TnfP06804 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.21■□□□□ 0.67
TnfP06804 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.21■□□□□ 0.67
TnfP06804 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TnfP06804 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Golph3-205ENSMUST00000228671 2842 ntBASIC19.21■□□□□ 0.67
TnfP06804 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TnfP06804 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.21■□□□□ 0.67
TnfP06804 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnfP06804 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TnfP06804 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.2■□□□□ 0.66
TnfP06804 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TnfP06804 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TnfP06804 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnfP06804 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TnfP06804 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TnfP06804 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms