Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.14■□□□□ 0.17
P06344 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Gm22240-201ENSMUST00000175225 82 ntBASIC16.14■□□□□ 0.17
P06344 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.14■□□□□ 0.17
P06344 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.14■□□□□ 0.17
P06344 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
P06344 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
P06344 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.14■□□□□ 0.17
P06344 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06344 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
P06344 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P06344 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
P06344 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P06344 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P06344 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P06344 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
P06344 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P06344 Gm11249-201ENSMUST00000117071 859 ntBASIC16.13■□□□□ 0.17
P06344 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.13■□□□□ 0.17
P06344 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.13■□□□□ 0.17
P06344 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.13■□□□□ 0.17
P06344 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P06344 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.13■□□□□ 0.17
P06344 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.12■□□□□ 0.17
P06344 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.12■□□□□ 0.17
P06344 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
P06344 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.12■□□□□ 0.17
P06344 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.12■□□□□ 0.17
P06344 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P06344 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
P06344 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
P06344 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.11■□□□□ 0.17
P06344 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.11■□□□□ 0.17
P06344 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.11■□□□□ 0.17
P06344 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.11■□□□□ 0.17
P06344 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
P06344 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.11■□□□□ 0.17
P06344 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P06344 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Flg-201ENSMUST00000050758 1488 ntBASIC16.1■□□□□ 0.17
P06344 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
P06344 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
P06344 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P06344 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.09■□□□□ 0.17
P06344 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P06344 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.09■□□□□ 0.17
P06344 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.09■□□□□ 0.17
P06344 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.09■□□□□ 0.17
P06344 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P06344 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.09■□□□□ 0.17
P06344 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P06344 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms