Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Gm2399-201ENSMUST00000104944 225 ntBASIC16.73■□□□□ 0.27
P06336 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.73■□□□□ 0.27
P06336 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
P06336 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
P06336 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06336 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
P06336 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.72■□□□□ 0.27
P06336 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.72■□□□□ 0.27
P06336 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
P06336 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
P06336 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.72■□□□□ 0.27
P06336 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
P06336 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.72■□□□□ 0.27
P06336 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06336 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06336 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06336 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.71■□□□□ 0.27
P06336 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P06336 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.71■□□□□ 0.27
P06336 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P06336 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P06336 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.71■□□□□ 0.27
P06336 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.71■□□□□ 0.27
P06336 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06336 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
P06336 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
P06336 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
P06336 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
P06336 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.7■□□□□ 0.26
P06336 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Gm2559-201ENSMUST00000201323 363 ntBASIC16.7■□□□□ 0.26
P06336 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.7■□□□□ 0.26
P06336 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06336 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
P06336 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
P06336 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.69■□□□□ 0.26
P06336 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
P06336 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.69■□□□□ 0.26
P06336 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06336 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.69■□□□□ 0.26
P06336 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06336 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06336 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06336 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06336 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P06336 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.68■□□□□ 0.26
P06336 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.68■□□□□ 0.26
P06336 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.68■□□□□ 0.26
P06336 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06336 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms